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DNA constructs from DeMatteis lab	Data Management Training Workshop Cambridge 2010	Data type taskforces
Data types and attributes in a lipid species data base	Data types and attributes in lipid species databases	Databases
Databases for lipid species	Davies et al.	Degradation of FA (b-oxidation)
Deliverables	Dennis et al	Description of MS methods in databases
Description of samples in databases	Di-glycerol tetraether phospholipids (caldarchaeols) (GP18)	Differential Expression using the B-Fabric Analysis tool
Differential Expression with ChipInspector	Differential Expression with Chipinspector	Discussion on lipid standards in LipidomicNet
Discussion on the mass spectrometric analysis of triglyceride rich samples	Docosanoids (FA04)	Document:From SDS to Integromics software.doc
Downloads	EU Framework VII project "LipidomicNet"	Eiconsanoid determination - Harkewitz et al.
Eicosanoid determination - Harkewitz et al.	Eicosanoid determination - Masoodi et al.	Eicosanoid determination - Yue et al.
Eicosanoids	Eicosanoids (FA03)	Ensembl genes without Agilent Probe ID
Epoxyeicosatrienoic acids (EETs)	Epoxyeicosatrienoic acids (FA0308)	Equipment in LipidomicNet
Erythrocyte	Erythrocyte isolation	Erythrocyte isolation and cultivation
Erythrocytes	Ethics proposals	Events
Events:External	Events:Internal	Events: External
Events: Internal	Exchange Grants	Extension:Navigation path
Extensions LS/myCSS.css	FAQ	FAS II
FATP	FA uptake and transport proteins	FXR
FXR, LXRα, and PPAR regulation of triglyceride metabolism	FXR and LXRα regulation of lipoprotein metabolism	FXR regulation of bile acid synthesis, transport and absorption
Farwanah et al.	Fatty Acid Profiling GC-MS	Fatty Acid analysis - GCMS
Fatty Acid analysis by GCMS	Fatty Acids	Fatty Acids and Conjugates (FA01)
Fatty Acyls (FA)	Fatty Acyls analysis by mass spectrometry	Fatty acid metabolism
Fatty acid oxidative conversion	Fatty acid remodelling	Filipin staining of cells
Finland	First Bioinformatics Workshop	First Bioinformatics Workshop, Sept 2008
First Bioinformatics Workshop - presentations	Fixation and permeabilization protocols from DeMAtteis lab	Fixation of cells with 4% paraformaldehyde
Fixed/permeabilized cultured cells - BD Pathway Bioimager 855 (JUMC)	Flow cytometry	Fluorescence Microscopy (High-Content Imaging) SPP for the Evotec Opera automated microscope
Fluorescence Microscopy (High-Content Imaging) SPP for the analysis of lipid droplets for the Discovery-1 automated microscope of Molecular Devices	Fluorescent microscopy of neutral lipids in yeast	Free cholesterol/cholesterol ester distribution
Freeze Fracture	Funding for researchers	G-Protein Receptors lipid binding 20110810
GC-MS	GENE LIST Glycerophospholipid metabolism	Ganglioside extraction
Genes involved in sphingolipid metabolism	Germany	Glycerol-nonitol tetraether phospholipids (GP19)
Glycerolipid Profiling - FT-MS	Glycerolipids	Glycerolipids (GL)
Glycerophosphates (GP10)	Glycerophosphatidylinositol (GPI)-anchor	Glycerophosphatidylinositol (GPI)-anchor biosynthesis
Glycerophosphocholines (GP01)	Glycerophosphoethanolamines (GP02)	Glycerophosphoglycerols (GP04)
Glycerophosphoglycerophosphates (GP05)	Glycerophosphoglycerophosphoglycerols (GP12)	Glycerophosphoinositolglycans (GP15)
Glycerophosphoinositols (GP06) / phosphates (GP07-09)	Glycerophosphoinositols (GP06) / phosphates (GP07-9)	Glycerophospholipid Profiling - FT-MS
Glycerophospholipid Profiling - LC-MS/MS	Glycerophospholipids	Glycerophospholipids (GP)
Glycerophospholipids analysis by mass spectrometry	Glycerophosphonocholines (GP16)	Glycerophosphonoethanolamines (GP17)
Glycerophosphoserines (GP03)	Glyceropyrophosphates (GP11)	Glycosphingolipid biosynthesis
Glycosphingolipid degradation	Glycosphingolipid metabolism	Glycosphingolipids
Glycosylglycerophospholipids (GP14)	Granulocyte-enrichment	Granulocyte isolation
Gunderson	Gunderson et al.	HF diet for mouse feeding
HMG-CoA reductase assay	HNF	HTP Image analysis of LD size in differentiated adipocytes
HUVEC isolation and cloning	HUVEC isolation and cloning (JUMC)	Handling Synopsis Lists
Harkewitz1 et al.	Harkewitz et al	Harkewitz et al.
Haschke et al.	Hepatocyte and Stellate cell isolation from mouse liver	High-Content Imaging SPPs
High pressure freezing and freeze substitution of cells grown on Aclar discs (Burger lab)	High pressure freezing and freeze substitution of cells grown on Aclar discs (Burger lab)?action=view	High throughput workshop
High throughput workshop - March 2009	Hybridization of labeled RNA to cDNA Microarrays	Hydroxy/hydroperoxyeicosatetraenoic acids (FA0306)
Hydroxyeicosatetraenoic acids (HETEs)	Images acquisition and analysis from De Matteis laboratory	Imaging of lipid droplets, nuclei and cytoplasm in the 96-well format (Thiele lab)
Immunofluorescence and Bodipy staining of lipid droplets	Implementation of High-Content Imaging SPPs	Implementation of Mass Spectrometry of Lipids SPPs
Implementation of Microarray SPPs	Implementation of Proteomics SPPs	Implementation of Standard Processing Procedures
Implementation of TaqMan SPPs	In vivo cell monitoring - BD Pathway Bioimager 855 (JUMC)	Inositol phosphates
International lipid meetings	Isolation of lipid droplets from mouse primary hepatocytes	Isolation of primary hepatocytes from mouse liver
Isoprenoids/Retinoids	Isoprostanes	Jansen et al
Kane et al.	Kerstin Leuthaeuser-Jaschinski	Kick off meeting
Kick off meeting - June 2008	LC-MS	LXR
Lembcke et al.	Leukocyte populations and platelets	Leukotrienes
Leukotrienes (FA0302)	Liebisch(1) et al.	Liebisch(2) et al.
Liebisch(3) et al.	Liebisch et al.	Lieser et al.
Links	Lipases and LCAT	Lipid Class
Lipid Conference Calendar	Lipid Storage Genes	Lipid extraction
Lipid extraction according to Bligh&Dyer	Lipid extraction according to Bligh and Dyer	Lipid extraction according to Folch
Lipid extraction according to modified Folch	Lipid extraction for TLC (Chloroform-Methanol, Thiele lab)	Lipid extraction from yeast
Lipid extraction using Butanol	Lipid extraction using MTBE	Lipid mass spectrometric methods established in LipidomicNet
Lipid mass spectrometry	Lipid mass spectrometry/methods by analytes	Lipid mass spectrometry - methods by analytes
Lipid mass spectrometry SOPs deliverable status	Lipid mass spectrometry equipment in LipidomicNet	Lipid microdomains
Lipid probes	Lipid standards in the LipidomicNet	Lipid standards needed in LipidomicNet
Lipid standards used in LipidomicNet	Lipid standards used in LipidomicNet - Glycerophospholipids	Lipid standards used in LipidomicNet - Sphingolipids
Lipid standards used in LipidomicNet - Sterols	LipidomicNet-ENOR joint workshop	LipidomicNet-ENOR workshop program
LipidomicNet Final Meeting - 10/2012	LipidomicNet Library	LipidomicNet publications
Lipidomics technologies	Lipoprotein analysis by FPLC - ESI-MS/MS - Wiesner et al.	Lipoprotein preparation
Lipoprotein separation by FPLC - Wiesner et al.	Lipoprotein sphingolipids as potential atherogenic factors	Lipoxins
Lipoxins (FA0304)	Lysophosphatidylcholine - ESI-MS/MS - Liebisch et al.	Lysophosphatidylcholine determination - Liebisch et al.
Lysophospholipids	Lysosomal lipid-binding proteins: purification	Lysosomal storage disorders
MT 01.10.2008	MT 02.07.2008	MT 03.03.2010
MT 03.09.2008	MT 03.12.2008	MT 05.11.2008
MT 06.08.2008	MT 08.10.2008	MT 09.07.2008
MT 10.09.2008	MT 10.11.2008	MT 10.12.2008
MT 13.08.2008	MT 14.01.2009	MT 15.06.2008
MT 15.10.2008	MT 16.07.2008	MT 17.09.2008
MT 17.12.2008	MT 19.11.2008	MT 20.08.2008
MT 21.01.2009	MT 22.10.2008	MT 23.07.2008
MT 24.09.2008	MT 24.12.2008	MT 25.06.2008
MT 26.11.2008	MT 27.08.2008	MT 29.10.2008
MT 30.07.2008	Magnetic bead isolation of Mitochondria and following western blot analysis	Main Page
Masoodi et al	Masoodi et al.	Masoodi et al..
Masoodi et al...	Mass Spectrometry of Lipids SPPs	Mass spectrometric profiling of free extractable stratum corneum ceramides by means of LC/APCI-MS
Mass spectrometric profiling of free extractable stratum corneum ceramides by means of LC/APCI-MS-Farwanah et al.	Mass spectrometry	Mechanisms of bile acid feedback inhibition of gene transcription
Meeting Plan	Megacaryocyte Platelet Synopsis	Megakaryocyte Platelet Synopsis
Membranes	Metabolic diseases	Metabolism and subcellular compartmentalization of sphingolipids
Methods established in LipidomicNet	Mezine et al.	Microarray SPPs
Microarrays	Monoacylglycerophospholipids	Monocyte Isolation
Monoradylglycerols	Mouse Key Nodes	Netherlands
Neutral glycosphingolipids (SP05)	New page	Nicolaou et al
No Access	Nomenclature of lipid species	Non targeted Lipid Profiling LC-FT-MS/MS
Nuclear receptor regulation of bile acid synthesis	Nuclear receptors	Offline nanoESI Phospholipid Profiling - LC-MS/MS
Other hydroxylase pathways	Oxidized glycerophospholipids (GP20)	Oxysterol-binding proteins
Oxysterol binding assay	Oxysterols	P01 UHREG
P02 UU	P03 CMNS	P04 INSERM
P05 LUMC	P06 ETHZ	P07 UNIGRAZ
P08 UGOT	P09 JUMC	P10 MPG
P11 BRC HAS	P12 IEE SAS	P13 BABRAHAM
P14 UH	P15A UBO	P15B UBO
P15 UBO	P16 EMBL	P17 UMG-GOE
P17 UMG GOE	P18 BIOBASE	P19 ZORA
P20 PROTAGEN	P21 INTEGROMICS	P22 UOXF.H7
P23 MRC	P24 JKU	P25 ISB
P26 WWU	P27 JUMC	P28 JKU
PPAR	PRP-platelet rich plasma	PXR/SXR
Palmitoylation	Perwaiz et al.	Phosphatidic acid
Phosphatidylcholine	Phosphatidylcholine / Sphingomyelin - ESI-MS/MS - Liebisch et al.	Phosphatidylcholine / Sphingomyelin determination - Liebisch et al.
Phosphatidylethanolamine	Phosphatidylethanolamine-based plasmalogens - ESI-MS/MS - Liebisch et al.	Phosphatidylethanolamine - ESI-MS/MS - Liebisch et al.
Phosphatidylglycerol	Phosphatidylinositol and -inositolphosphates	Phosphatidylinositol metabolism
Phosphatidylinositol metabolismmetabolism	Phosphatidylserine	Phosphatidylserine - ESI-MS/MS - Liebisch et al.
Phospholipid and neutral lipid droplet staining	Phospholipid class-specific profiling by LC/MS (Utrecht protocol)	Phospholipid metabolism
Phospholipidosis detection	Phosphosphingolipids (SP03)	Plant sterols
Platelet isolation	Polyketides	Prenol Lipids
Prenylation	Preparation of delipidated FCS (Thiele lab)	Preprocessing and differential expression with CARMAWeb
Preprocessing of Single Colored Agilent Arrays	Press releases	Processing Pipeline for High-Content Imaging SPPs
Processing Pipeline for Mass Spectrometry of Lipids SPPs	Processing Pipeline for Microarray SPPs	Processing Pipeline for Proteomics SPPs
Processing Pipeline for TaqMan SPPs	Processing Pipelines	Profiling of Neutral Lipids (Utrecht protocol)
Profiling of Phospholipids (Utrecht protocol)	Project Management	Project Status Report for Period 1
Project Status Report for Period 2	Project management	Proposal for lipid MS nomenclature
Proposal on lipid standards to be synthesized	Prostaglandin quantification - GC-MS	Prostaglandins
Prostaglandins (FA0301)	Proteomics SPPs	Protocols for stable isotope labeling
Purification LDs from mouse adipocytes	Purification LDs from mouse hepatocytes	Quinones and hydroquinones
ROR	RT-PCR SPPs	Real time interaction between immobilized liposomes and lipid binding proteins by Surface Plasmon Resonance
Regensburg2014	Regensburg Chip Hybridization Center	Resolvins, Docosatrienes and Neuroprotectins
Resources	Retinoid determination - Gunderson et al.	Retinoid determination - Kane et al.
Retinoid determination - Wang et al.	Roche SPPs	SHP-dependent mechanism
SHP-independent mechanisms	SVF human cells isolation and culture (JUMC)	Saccharolipids
Schmidt et al	Schmidt et al.	Schwedhelm et al.
Secosteroids (ST03)	Setup of a lipid species data base	Setup of a lipid species database
Shorthand notation - General rules	Shorthand notation for Fatty Acyls (FA)	Shorthand notation for Glycerolipids (GL)
Shorthand notation for Glycerophospholipids (GP)	Shorthand notation for Sphingolipids (SP)	Shorthand notation for Sterols (ST)
Shorthand notation for lipid structures derived from mass spectrometry	SiRNA knock down - A431 cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)	SiRNA knock down - A431 cells - 24 well plate - biochemical analysis (Thiele lab)
SiRNA knock down - HeLa cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)	SiRNA knock down - HeLa cells - 24 well plate - biochemical analysis (Thiele lab)	SiRNA knock down - HuH7 cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)
SiRNA knock down - HuH7 cells - 24 well plate - biochemical analysis (Thiele lab)	Signalling pathways induced by sphingolipids	Sircar et al.
Site Map	Skin lipid analysis - HPTLC - Farwanah et al.	Sphingoid bases/-phosphates
Sphingoid bases (SP01)	Sphingolipid analysis by mass spectrometry	Sphingolipid profiling - LC-MS/MS - Scherer et al.
Sphingolipids	Sphingolipids (SP)	Sphingolipids and apoptosis
Sphingolipids and cell differentiation	Sphingolipids and cell migration and adhesion	Sphingolipids and vascular tone regulation
Sphingomyelin	Sphingosine-1-phosphate, Lysophosphatidic acid - LC-MS/MS - Scherer et al.	Sphingosine-1-phosphate - LC-MS/MS - Berdyshev et al.
Sphingosine-1-phosphate - LC-MS/MS - Bielawski et al.	Sphingosine-1-phosphate - LC-MS/MS - Schmidt et al.	Sphingosine-1-phosphate determination - Berdyshev et al.
Sphingosine-1-phosphate determination - Bielawski et al.	Sphingosine-1-phosphate determination - Schmidt et al.	Sphingosine-1-phosphate quantitation
Sphingosine/Sphinganine - LC-MS/MS - Lieser et al.	Sphingosine/Sphinganine determination - Lieser et al.	Staining of cells
Staining of lipid droplets with Nile red and BODIPY 493/503	Staining of lipid droplets with oil Red O	Standard Processing Procedures
Steering Committee Meeting - 01/2010	Steering Committee Meeting - 01/2011	Steering Committee Meeting - 01/2012
Steering Committee Meeting - 07/2009	Steering Committee Meeting - 07/2010	Steering Committee Meeting - 11/2008
Steering Committee Meeting 2011/06	Steering Committee Meeting Munich 2010	Steering Committee Meeting Regensburg, July 2009
Steering Committee Meeting Regensburg, November 2008	Steering Committee Meeting Regensburg July 2009	Steering Committee Review Meeting Zurich, July 5-6, 2010
Steroid conjugates (ST05)	Steroid hormones	Steroids (ST02)
Sterol analysis by mass spectrometry	Sterols	Sterols (ST)
Sterols (ST) determination - Lembcke et al.	Sterols (ST) determination - Mezine et al.	Sterols (ST01)
Subcategory: Monoacylglycerophospholipids	Synthesis and metabolism of straight chain fatty acids	Synthesis of PS and formation of PE in the mitochondrial PSDecarboxylation pathway
TF8 ActionPoints2010	TF 8 13.08.2008	TF 8 30.07.2008
TF IV 02.09.2008	TF IV 05.08.2008	TF IV 09.12.2008
TF IV 11.11.2008	TF IV 14.10.2008	TF IV 16.09.2008
TF IV 19.08.2008	TF IV 20.01.2009	TF IV 23.12.2008
TF IV 25.11.2008	TF IV 28.10.2008	TF IV 30.09.2008
TF IV 30.09.2008?action=view	TF I 21.10.2008	TF VIII 03.12.2008
TF VIII 08.10.2008	TF VIII 13.08.2008	TF VIII 19.11.2008
TF VIII 22.04.2009	TF VIII 22.10.2008	TF VIII 28.01.2009
TF VIII 30.07.2008	TF VIII ActionPoints 2010	TF VII 01.10.2008
TF VII 02.10.2008	TF VII 03.09.2008	TF VII 06.08.2008
TF VII 10.12.2008	TF VII 12.11.2008	TF VII 15.10.2008
TF VII 17.09.2008	TF VII 17.10.2008	TF VII 20.08.2008
TF VII 24.12.2008	TF VII 26.11.2008	TF VII 29.10.2008
TIC 2013 Tbilisi International Conference 2013	Tagged constructs of lipid droplet proteins for imaging	Tagliacozzi et al.
TaqMan Arrays	TaqMan Low-Density Array (TLDA)	TaqMan SPPs
Task Force I	Task Force II	Task Force III
Task Force IV	Task Force IX	Task Force I - internal pages
Task Force Overview	Task Force V	Task Force VI
Task Force VII	Task Force VIII	Task Force VIII phone conferences
Task Forces	Templates	Templates for new articles
Templates for presentations	Teststartpage	Teunissen et al.
The classic bile acid biosynthetic (neutral) pathway	The “Kennedy pathway” as the majour route of PC and PE synthesis	Thin layer chromatography (Thiele Lab)
Thromboxanes	Thromboxanes (FA0303)	Tools
Total Lipid Profiling LTQ-FT	Training	Transferproteins – CETP, PLTP
Triglyceride hydrolysis kinetics	UK	Uptake of glycerophospholipid precursors and the interconversion of glycerophospholipid species
Visualization of fixed/permeabilized cultured cells (JUMC)	Von Eckardstein	WP1
WP2	WP3	WP4
WP5	WP6	WP7
WP8	WP III TF V 05.09.2008	WP III TF V 14.10.2008
WP III TF V 25.11.2008	Wang et al.	Webex
Western blot of membrane proteins	Wiki Roadmap	Wikipedia:Customisation
Wikipedia:Introduction	Wikipedia:tutorial	Work Package Overview
Workshop - 03/2009	Workshop - 04/2010	Workshop - 09/2008
Workshop - 09/2008 - presentations	Workshop - 10/2009	Workshop - 10/2009 - Abstracts
Workshop - 2008/09	Workshop - 2008/09 - presentations	Workshop - 2009/03
Workshop - 2009/10	Workshop - 2009/10 - Abstracts	Workshop - 2010/04
Workshop - 2011/05	Workshop - 2011/10	Workshop - 2012/07
Workshop Graz 2009-10-26 27	Workshop Graz 2009-10-26 27 Abstracts	Yue et al
Yue et al.

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