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DNA constructs from DeMatteis lab	Data Management Training Workshop Cambridge 2010	Data type taskforces
Data types and attributes in a lipid species data base	Data types and attributes in lipid species databases	Databases
Davies et al.	Degradation of FA (b-oxidation)	Deliverables
Dennis et al	Description of MS methods in databases	Description of samples in databases
Di-glycerol tetraether phospholipids (caldarchaeols) (GP18)	Differential Expression using the B-Fabric Analysis tool	Differential Expression with ChipInspector
Differential Expression with Chipinspector	Discussion on lipid standards in LipidomicNet	Discussion on the mass spectrometric analysis of triglyceride rich samples
Docosanoids (FA04)	Document:From SDS to Integromics software.doc	Downloads
EU Framework VII project "LipidomicNet"	Eiconsanoid determination - Harkewitz et al.	Eicosanoid determination - Harkewitz et al.
Eicosanoid determination - Masoodi et al.	Eicosanoid determination - Yue et al.	Eicosanoids
Eicosanoids (FA03)	Ensembl genes without Agilent Probe ID	Epoxyeicosatrienoic acids (EETs)
Epoxyeicosatrienoic acids (FA0308)	Equipment in LipidomicNet	Erythrocyte
Erythrocyte isolation	Erythrocyte isolation and cultivation	Erythrocytes
Ethics proposals	Events	Events:External
Events:Internal	Events: External	Events: Internal
Exchange Grants	Extension:Navigation path	Extensions LS/myCSS.css
FAQ	FAS II	FATP
FA uptake and transport proteins	FXR	FXR, LXRα, and PPAR regulation of triglyceride metabolism
FXR and LXRα regulation of lipoprotein metabolism	FXR regulation of bile acid synthesis, transport and absorption	Farwanah et al.
Fatty Acid Profiling GC-MS	Fatty Acid analysis - GCMS	Fatty Acid analysis by GCMS
Fatty Acids	Fatty Acids and Conjugates (FA01)	Fatty Acyls (FA)
Fatty Acyls analysis by mass spectrometry	Fatty acid metabolism	Fatty acid oxidative conversion
Fatty acid remodelling	Filipin staining of cells	Finland
First Bioinformatics Workshop	First Bioinformatics Workshop, Sept 2008	First Bioinformatics Workshop - presentations
Fixation and permeabilization protocols from DeMAtteis lab	Fixation of cells with 4% paraformaldehyde	Fixed/permeabilized cultured cells - BD Pathway Bioimager 855 (JUMC)
Flow cytometry	Fluorescence Microscopy (High-Content Imaging) SPP for the Evotec Opera automated microscope	Fluorescence Microscopy (High-Content Imaging) SPP for the analysis of lipid droplets for the Discovery-1 automated microscope of Molecular Devices
Fluorescent microscopy of neutral lipids in yeast	Free cholesterol/cholesterol ester distribution	Freeze Fracture
G-Protein Receptors lipid binding 20110810	GC-MS	GENE LIST Glycerophospholipid metabolism
Ganglioside extraction	Genes involved in sphingolipid metabolism	Germany
Glycerol-nonitol tetraether phospholipids (GP19)	Glycerolipid Profiling - FT-MS	Glycerolipids
Glycerolipids (GL)	Glycerophosphates (GP10)	Glycerophosphatidylinositol (GPI)-anchor
Glycerophosphatidylinositol (GPI)-anchor biosynthesis	Glycerophosphocholines (GP01)	Glycerophosphoethanolamines (GP02)
Glycerophosphoglycerols (GP04)	Glycerophosphoglycerophosphates (GP05)	Glycerophosphoglycerophosphoglycerols (GP12)
Glycerophosphoinositolglycans (GP15)	Glycerophosphoinositols (GP06) / phosphates (GP07-09)	Glycerophosphoinositols (GP06) / phosphates (GP07-9)
Glycerophospholipid Profiling - FT-MS	Glycerophospholipid Profiling - LC-MS/MS	Glycerophospholipids
Glycerophospholipids (GP)	Glycerophospholipids analysis by mass spectrometry	Glycerophosphonocholines (GP16)
Glycerophosphonoethanolamines (GP17)	Glycerophosphoserines (GP03)	Glyceropyrophosphates (GP11)
Glycosphingolipid biosynthesis	Glycosphingolipid degradation	Glycosphingolipid metabolism
Glycosphingolipids	Glycosylglycerophospholipids (GP14)	Granulocyte-enrichment
Granulocyte isolation	Gunderson	Gunderson et al.
HF diet for mouse feeding	HMG-CoA reductase assay	HNF
HTP Image analysis of LD size in differentiated adipocytes	HUVEC isolation and cloning	HUVEC isolation and cloning (JUMC)
Handling Synopsis Lists	Harkewitz1 et al.	Harkewitz et al
Harkewitz et al.	Haschke et al.	Hepatocyte and Stellate cell isolation from mouse liver
High-Content Imaging SPPs	High pressure freezing and freeze substitution of cells grown on Aclar discs (Burger lab)	High pressure freezing and freeze substitution of cells grown on Aclar discs (Burger lab)?action=view
High throughput workshop	High throughput workshop - March 2009	Hybridization of labeled RNA to cDNA Microarrays
Hydroxy/hydroperoxyeicosatetraenoic acids (FA0306)	Hydroxyeicosatetraenoic acids (HETEs)	Images acquisition and analysis from De Matteis laboratory
Imaging of lipid droplets, nuclei and cytoplasm in the 96-well format (Thiele lab)	Immunofluorescence and Bodipy staining of lipid droplets	Implementation of High-Content Imaging SPPs
Implementation of Mass Spectrometry of Lipids SPPs	Implementation of Microarray SPPs	Implementation of Proteomics SPPs
Implementation of Standard Processing Procedures	Implementation of TaqMan SPPs	In vivo cell monitoring - BD Pathway Bioimager 855 (JUMC)
Inositol phosphates	International lipid meetings	Isolation of lipid droplets from mouse primary hepatocytes
Isolation of primary hepatocytes from mouse liver	Isoprenoids/Retinoids	Isoprostanes
Jansen et al	Kane et al.	Kerstin Leuthaeuser-Jaschinski
Kick off meeting	Kick off meeting - June 2008	LC-MS
LXR	Lembcke et al.	Leukocyte populations and platelets
Leukotrienes	Leukotrienes (FA0302)	Liebisch(1) et al.
Liebisch(2) et al.	Liebisch(3) et al.	Liebisch et al.
Lieser et al.	Links	Lipases and LCAT
Lipid Class	Lipid Storage Genes	Lipid extraction
Lipid extraction according to Bligh&Dyer	Lipid extraction according to Bligh and Dyer	Lipid extraction according to Folch
Lipid extraction according to modified Folch	Lipid extraction for TLC (Chloroform-Methanol, Thiele lab)	Lipid extraction from yeast
Lipid extraction using Butanol	Lipid extraction using MTBE	Lipid mass spectrometric methods established in LipidomicNet
Lipid mass spectrometry	Lipid mass spectrometry/methods by analytes	Lipid mass spectrometry - methods by analytes
Lipid mass spectrometry SOPs deliverable status	Lipid mass spectrometry equipment in LipidomicNet	Lipid microdomains
Lipid probes	Lipid standards in the LipidomicNet	Lipid standards needed in LipidomicNet
Lipid standards used in LipidomicNet	Lipid standards used in LipidomicNet - Glycerophospholipids	Lipid standards used in LipidomicNet - Sphingolipids
Lipid standards used in LipidomicNet - Sterols	LipidomicNet-ENOR joint workshop	LipidomicNet-ENOR workshop program
LipidomicNet Library	LipidomicNet publications	Lipidomics technologies
Lipoprotein analysis by FPLC - ESI-MS/MS - Wiesner et al.	Lipoprotein preparation	Lipoprotein separation by FPLC - Wiesner et al.
Lipoprotein sphingolipids as potential atherogenic factors	Lipoxins	Lipoxins (FA0304)
Lysophosphatidylcholine - ESI-MS/MS - Liebisch et al.	Lysophosphatidylcholine determination - Liebisch et al.	Lysophospholipids
Lysosomal lipid-binding proteins: purification	Lysosomal storage disorders	MT 01.10.2008
MT 02.07.2008	MT 03.03.2010	MT 03.09.2008
MT 03.12.2008	MT 05.11.2008	MT 06.08.2008
MT 08.10.2008	MT 09.07.2008	MT 10.09.2008
MT 10.11.2008	MT 10.12.2008	MT 13.08.2008
MT 14.01.2009	MT 15.06.2008	MT 15.10.2008
MT 16.07.2008	MT 17.09.2008	MT 17.12.2008
MT 19.11.2008	MT 20.08.2008	MT 21.01.2009
MT 22.10.2008	MT 23.07.2008	MT 24.09.2008
MT 24.12.2008	MT 25.06.2008	MT 26.11.2008
MT 27.08.2008	MT 29.10.2008	MT 30.07.2008
Magnetic bead isolation of Mitochondria and following western blot analysis	Main Page	Masoodi et al
Masoodi et al.	Masoodi et al..	Masoodi et al...
Mass Spectrometry of Lipids SPPs	Mass spectrometric profiling of free extractable stratum corneum ceramides by means of LC/APCI-MS	Mass spectrometric profiling of free extractable stratum corneum ceramides by means of LC/APCI-MS-Farwanah et al.
Mass spectrometry	Mechanisms of bile acid feedback inhibition of gene transcription	Meeting Plan
Megacaryocyte Platelet Synopsis	Megakaryocyte Platelet Synopsis	Membranes
Metabolic diseases	Metabolism and subcellular compartmentalization of sphingolipids	Methods established in LipidomicNet
Mezine et al.	Microarray SPPs	Microarrays
Monoacylglycerophospholipids	Monocyte Isolation	Monoradylglycerols
Mouse Key Nodes	Netherlands	Neutral glycosphingolipids (SP05)
New page	Nicolaou et al	No Access
Non targeted Lipid Profiling LC-FT-MS/MS	Nuclear receptor regulation of bile acid synthesis	Nuclear receptors
Offline nanoESI Phospholipid Profiling - LC-MS/MS	Other hydroxylase pathways	Oxidized glycerophospholipids (GP20)
Oxysterol-binding proteins	Oxysterol binding assay	Oxysterols
P01 UHREG	P02 UU	P03 CMNS
P04 INSERM	P05 LUMC	P06 ETHZ
P07 UNIGRAZ	P08 UGOT	P09 JUMC
P10 MPG	P11 BRC HAS	P12 IEE SAS
P13 BABRAHAM	P14 UH	P15A UBO
P15B UBO	P15 UBO	P16 EMBL
P17 UMG-GOE	P17 UMG GOE	P18 BIOBASE
P19 ZORA	P20 PROTAGEN	P21 INTEGROMICS
P22 UOXF.H7	P23 MRC	P24 JKU
P25 ISB	P26 WWU	P27 JUMC
P28 JKU	PPAR	PRP-platelet rich plasma
PXR/SXR	Palmitoylation	Perwaiz et al.
Phosphatidic acid	Phosphatidylcholine	Phosphatidylcholine / Sphingomyelin - ESI-MS/MS - Liebisch et al.
Phosphatidylcholine / Sphingomyelin determination - Liebisch et al.	Phosphatidylethanolamine	Phosphatidylethanolamine-based plasmalogens - ESI-MS/MS - Liebisch et al.
Phosphatidylethanolamine - ESI-MS/MS - Liebisch et al.	Phosphatidylglycerol	Phosphatidylinositol and -inositolphosphates
Phosphatidylinositol metabolism	Phosphatidylinositol metabolismmetabolism	Phosphatidylserine
Phosphatidylserine - ESI-MS/MS - Liebisch et al.	Phospholipid and neutral lipid droplet staining	Phospholipid class-specific profiling by LC/MS (Utrecht protocol)
Phospholipid metabolism	Phospholipidosis detection	Phosphosphingolipids (SP03)
Plant sterols	Platelet isolation	Polyketides
Prenol Lipids	Prenylation	Preparation of delipidated FCS (Thiele lab)
Preprocessing and differential expression with CARMAWeb	Preprocessing of Single Colored Agilent Arrays	Press releases
Processing Pipeline for High-Content Imaging SPPs	Processing Pipeline for Mass Spectrometry of Lipids SPPs	Processing Pipeline for Microarray SPPs
Processing Pipeline for Proteomics SPPs	Processing Pipeline for TaqMan SPPs	Processing Pipelines
Profiling of Neutral Lipids (Utrecht protocol)	Profiling of Phospholipids (Utrecht protocol)	Project Management
Project Status Report for Period 1	Project Status Report for Period 2	Project management
Proposal for lipid MS nomenclature	Proposal on lipid standards to be synthesized	Prostaglandin quantification - GC-MS
Prostaglandins	Prostaglandins (FA0301)	Proteomics SPPs
Protocols for stable isotope labeling	Purification LDs from mouse adipocytes	Purification LDs from mouse hepatocytes
Quinones and hydroquinones	ROR	RT-PCR SPPs
Real time interaction between immobilized liposomes and lipid binding proteins by Surface Plasmon Resonance	Regensburg Chip Hybridization Center	Resolvins, Docosatrienes and Neuroprotectins
Resources	Retinoid determination - Gunderson et al.	Retinoid determination - Kane et al.
Retinoid determination - Wang et al.	Roche SPPs	SHP-dependent mechanism
SHP-independent mechanisms	SVF human cells isolation and culture (JUMC)	Saccharolipids
Schmidt et al	Schmidt et al.	Schwedhelm et al.
Secosteroids (ST03)	Setup of a lipid species data base	Setup of a lipid species database
SiRNA knock down - A431 cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)	SiRNA knock down - A431 cells - 24 well plate - biochemical analysis (Thiele lab)	SiRNA knock down - HeLa cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)
SiRNA knock down - HeLa cells - 24 well plate - biochemical analysis (Thiele lab)	SiRNA knock down - HuH7 cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)	SiRNA knock down - HuH7 cells - 24 well plate - biochemical analysis (Thiele lab)
Signalling pathways induced by sphingolipids	Sircar et al.	Site Map
Skin lipid analysis - HPTLC - Farwanah et al.	Sphingoid bases/-phosphates	Sphingoid bases (SP01)
Sphingolipid analysis by mass spectrometry	Sphingolipid profiling - LC-MS/MS - Scherer et al.	Sphingolipids
Sphingolipids (SP)	Sphingolipids and apoptosis	Sphingolipids and cell differentiation
Sphingolipids and cell migration and adhesion	Sphingolipids and vascular tone regulation	Sphingomyelin
Sphingosine-1-phosphate, Lysophosphatidic acid - LC-MS/MS - Scherer et al.	Sphingosine-1-phosphate - LC-MS/MS - Berdyshev et al.	Sphingosine-1-phosphate - LC-MS/MS - Bielawski et al.
Sphingosine-1-phosphate - LC-MS/MS - Schmidt et al.	Sphingosine-1-phosphate determination - Berdyshev et al.	Sphingosine-1-phosphate determination - Bielawski et al.
Sphingosine-1-phosphate determination - Schmidt et al.	Sphingosine-1-phosphate quantitation	Sphingosine/Sphinganine - LC-MS/MS - Lieser et al.
Sphingosine/Sphinganine determination - Lieser et al.	Staining of cells	Staining of lipid droplets with Nile red and BODIPY 493/503
Staining of lipid droplets with oil Red O	Standard Processing Procedures	Steering Committee Meeting - 01/2010
Steering Committee Meeting - 01/2011	Steering Committee Meeting - 01/2012	Steering Committee Meeting - 07/2009
Steering Committee Meeting - 07/2010	Steering Committee Meeting - 11/2008	Steering Committee Meeting 2011/06
Steering Committee Meeting Munich 2010	Steering Committee Meeting Regensburg, July 2009	Steering Committee Meeting Regensburg, November 2008
Steering Committee Meeting Regensburg July 2009	Steering Committee Review Meeting Zurich, July 5-6, 2010	Steroid conjugates (ST05)
Steroid hormones	Steroids (ST02)	Sterol analysis by mass spectrometry
Sterols	Sterols (ST)	Sterols (ST) determination - Lembcke et al.
Sterols (ST) determination - Mezine et al.	Sterols (ST01)	Subcategory: Monoacylglycerophospholipids
Synthesis and metabolism of straight chain fatty acids	Synthesis of PS and formation of PE in the mitochondrial PSDecarboxylation pathway	TF8 ActionPoints2010
TF 8 13.08.2008	TF 8 30.07.2008	TF IV 02.09.2008
TF IV 05.08.2008	TF IV 09.12.2008	TF IV 11.11.2008
TF IV 14.10.2008	TF IV 16.09.2008	TF IV 19.08.2008
TF IV 20.01.2009	TF IV 23.12.2008	TF IV 25.11.2008
TF IV 28.10.2008	TF IV 30.09.2008	TF IV 30.09.2008?action=view
TF I 21.10.2008	TF VIII 03.12.2008	TF VIII 08.10.2008
TF VIII 13.08.2008	TF VIII 19.11.2008	TF VIII 22.04.2009
TF VIII 22.10.2008	TF VIII 28.01.2009	TF VIII 30.07.2008
TF VIII ActionPoints 2010	TF VII 01.10.2008	TF VII 02.10.2008
TF VII 03.09.2008	TF VII 06.08.2008	TF VII 10.12.2008
TF VII 12.11.2008	TF VII 15.10.2008	TF VII 17.09.2008
TF VII 17.10.2008	TF VII 20.08.2008	TF VII 24.12.2008
TF VII 26.11.2008	TF VII 29.10.2008	Tagged constructs of lipid droplet proteins for imaging
Tagliacozzi et al.	TaqMan Arrays	TaqMan Low-Density Array (TLDA)
TaqMan SPPs	Task Force I	Task Force II
Task Force III	Task Force IV	Task Force IX
Task Force I - internal pages	Task Force Overview	Task Force V
Task Force VI	Task Force VII	Task Force VIII
Task Force VIII phone conferences	Task Forces	Templates
Templates for new articles	Templates for presentations	Teststartpage
Teunissen et al.	The classic bile acid biosynthetic (neutral) pathway	The “Kennedy pathway” as the majour route of PC and PE synthesis
Thin layer chromatography (Thiele Lab)	Thromboxanes	Thromboxanes (FA0303)
Tools	Total Lipid Profiling LTQ-FT	Training
Transferproteins – CETP, PLTP	Triglyceride hydrolysis kinetics	UK
Uptake of glycerophospholipid precursors and the interconversion of glycerophospholipid species	Visualization of fixed/permeabilized cultured cells (JUMC)	Von Eckardstein
WP1	WP2	WP3
WP4	WP5	WP6
WP7	WP8	WP III TF V 05.09.2008
WP III TF V 14.10.2008	WP III TF V 25.11.2008	Wang et al.
Webex	Western blot of membrane proteins	Wiki Roadmap
Wikipedia:Customisation	Wikipedia:Introduction	Wikipedia:tutorial
Work Package Overview	Workshop - 03/2009	Workshop - 04/2010
Workshop - 09/2008	Workshop - 09/2008 - presentations	Workshop - 10/2009
Workshop - 10/2009 - Abstracts	Workshop - 2008/09	Workshop - 2008/09 - presentations
Workshop - 2009/03	Workshop - 2009/10	Workshop - 2009/10 - Abstracts
Workshop - 2010/04	Workshop - 2011/05	Workshop - 2011/10
Workshop Graz 2009-10-26 27	Workshop Graz 2009-10-26 27 Abstracts	Yue et al
Yue et al.

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