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CAR	CDP-Glycerols (GP13)	Cardiovascular diseases
Cell culture from DeMatteis lab	Cell isolation procedures	Cell proliferation BrdU (JUMC)
Ceramide	Ceramide - ESI-MS/MS - Liebisch et al.	Ceramide Profiling LC-MS/MS
Ceramide determination - Liebisch et al.	Ceramide phosphocholines (sphingomyelins) (SP0301)	Ceramides (SP02)
Ceramides - stratum corneum, free extractable - LC-MS - Farwanah et al.	Choesterol / Cholesterylester determination - Liebisch et al.	Cholesterol
Cholesterol/sterol analysis - GCMS	Cholesterol / Cholesterylester - ESI-MS/MS - Liebisch et al.	Cholesterol / Cholesterylester determination - Liebisch et al.
Cholesterol analysis - GCMS	Cholesterol biosynthesis assay	Cholesterol sulfate
Cholesteroylation	Cholesteryl ester synthesis assay	Contact
Current events	Cytotoxicity assay (JUMC)	DNA constructs from DeMatteis lab
Data Management Training Workshop Cambridge 2010	Data type taskforces	Data types and attributes in a lipid species data base
Data types and attributes in lipid species databases	Databases	Davies et al.
Degradation of FA (b-oxidation)	Deliverables	Dennis et al
Description of MS methods in databases	Description of samples in databases	Di-glycerol tetraether phospholipids (caldarchaeols) (GP18)
Differential Expression using the B-Fabric Analysis tool	Differential Expression with ChipInspector	Differential Expression with Chipinspector
Discussion on lipid standards in LipidomicNet	Discussion on the mass spectrometric analysis of triglyceride rich samples	Docosanoids (FA04)
Document:From SDS to Integromics software.doc	Downloads	EU Framework VII project "LipidomicNet"
Eiconsanoid determination - Harkewitz et al.	Eicosanoid determination - Harkewitz et al.	Eicosanoid determination - Masoodi et al.
Eicosanoid determination - Yue et al.	Eicosanoids	Eicosanoids (FA03)
Ensembl genes without Agilent Probe ID	Epoxyeicosatrienoic acids (EETs)	Epoxyeicosatrienoic acids (FA0308)
Equipment in LipidomicNet	Erythrocyte	Erythrocyte isolation
Erythrocyte isolation and cultivation	Erythrocytes	Ethics proposals
Events	Events:External	Events:Internal
Events: External	Events: Internal	Exchange Grants
Extension:Navigation path	Extensions LS/myCSS.css	FAQ
FAS II	FATP	FA uptake and transport proteins
FXR	FXR, LXRα, and PPAR regulation of triglyceride metabolism	FXR and LXRα regulation of lipoprotein metabolism
FXR regulation of bile acid synthesis, transport and absorption	Farwanah et al.	Fatty Acid Profiling GC-MS
Fatty Acid analysis - GCMS	Fatty Acid analysis by GCMS	Fatty Acids
Fatty Acids and Conjugates (FA01)	Fatty Acyls (FA)	Fatty Acyls analysis by mass spectrometry
Fatty acid metabolism	Fatty acid oxidative conversion	Fatty acid remodelling
Filipin staining of cells	Finland	First Bioinformatics Workshop
First Bioinformatics Workshop, Sept 2008	First Bioinformatics Workshop - presentations	Fixation and permeabilization protocols from DeMAtteis lab
Fixation of cells with 4% paraformaldehyde	Fixed/permeabilized cultured cells - BD Pathway Bioimager 855 (JUMC)	Flow cytometry
Fluorescence Microscopy (High-Content Imaging) SPP for the Evotec Opera automated microscope	Fluorescence Microscopy (High-Content Imaging) SPP for the analysis of lipid droplets for the Discovery-1 automated microscope of Molecular Devices	Fluorescent microscopy of neutral lipids in yeast
Free cholesterol/cholesterol ester distribution	Freeze Fracture	G-Protein Receptors lipid binding 20110810
GC-MS	GENE LIST Glycerophospholipid metabolism	Ganglioside extraction
Genes involved in sphingolipid metabolism	Germany	Glycerol-nonitol tetraether phospholipids (GP19)
Glycerolipid Profiling - FT-MS	Glycerolipids	Glycerolipids (GL)
Glycerophosphates (GP10)	Glycerophosphatidylinositol (GPI)-anchor	Glycerophosphatidylinositol (GPI)-anchor biosynthesis
Glycerophosphocholines (GP01)	Glycerophosphoethanolamines (GP02)	Glycerophosphoglycerols (GP04)
Glycerophosphoglycerophosphates (GP05)	Glycerophosphoglycerophosphoglycerols (GP12)	Glycerophosphoinositolglycans (GP15)
Glycerophosphoinositols (GP06) / phosphates (GP07-09)	Glycerophosphoinositols (GP06) / phosphates (GP07-9)	Glycerophospholipid Profiling - FT-MS
Glycerophospholipid Profiling - LC-MS/MS	Glycerophospholipids	Glycerophospholipids (GP)
Glycerophospholipids analysis by mass spectrometry	Glycerophosphonocholines (GP16)	Glycerophosphonoethanolamines (GP17)
Glycerophosphoserines (GP03)	Glyceropyrophosphates (GP11)	Glycosphingolipid biosynthesis
Glycosphingolipid degradation	Glycosphingolipid metabolism	Glycosphingolipids
Glycosylglycerophospholipids (GP14)	Granulocyte-enrichment	Granulocyte isolation
Gunderson	Gunderson et al.	HF diet for mouse feeding
HMG-CoA reductase assay	HNF	HTP Image analysis of LD size in differentiated adipocytes
HUVEC isolation and cloning	HUVEC isolation and cloning (JUMC)	Handling Synopsis Lists
Harkewitz1 et al.	Harkewitz et al	Harkewitz et al.
Haschke et al.	Hepatocyte and Stellate cell isolation from mouse liver	High-Content Imaging SPPs
High pressure freezing and freeze substitution of cells grown on Aclar discs (Burger lab)	High pressure freezing and freeze substitution of cells grown on Aclar discs (Burger lab)?action=view	High throughput workshop
High throughput workshop - March 2009	Hybridization of labeled RNA to cDNA Microarrays	Hydroxy/hydroperoxyeicosatetraenoic acids (FA0306)
Hydroxyeicosatetraenoic acids (HETEs)	Images acquisition and analysis from De Matteis laboratory	Imaging of lipid droplets, nuclei and cytoplasm in the 96-well format (Thiele lab)
Immunofluorescence and Bodipy staining of lipid droplets	Implementation of High-Content Imaging SPPs	Implementation of Mass Spectrometry of Lipids SPPs
Implementation of Microarray SPPs	Implementation of Proteomics SPPs	Implementation of Standard Processing Procedures
Implementation of TaqMan SPPs	In vivo cell monitoring - BD Pathway Bioimager 855 (JUMC)	Inositol phosphates
International lipid meetings	Isolation of lipid droplets from mouse primary hepatocytes	Isolation of primary hepatocytes from mouse liver
Isoprenoids/Retinoids	Isoprostanes	Jansen et al
Kane et al.	Kerstin Leuthaeuser-Jaschinski	Kick off meeting
Kick off meeting - June 2008	LC-MS	LXR
Lembcke et al.	Leukocyte populations and platelets	Leukotrienes
Leukotrienes (FA0302)	Liebisch(1) et al.	Liebisch(2) et al.
Liebisch(3) et al.	Liebisch et al.	Lieser et al.
Links	Lipases and LCAT	Lipid Class
Lipid Storage Genes	Lipid extraction	Lipid extraction according to Bligh&Dyer
Lipid extraction according to Bligh and Dyer	Lipid extraction according to Folch	Lipid extraction according to modified Folch
Lipid extraction for TLC (Chloroform-Methanol, Thiele lab)	Lipid extraction from yeast	Lipid extraction using Butanol
Lipid extraction using MTBE	Lipid mass spectrometric methods established in LipidomicNet	Lipid mass spectrometry
Lipid mass spectrometry/methods by analytes	Lipid mass spectrometry - methods by analytes	Lipid mass spectrometry SOPs deliverable status
Lipid mass spectrometry equipment in LipidomicNet	Lipid microdomains	Lipid probes
Lipid standards in the LipidomicNet	Lipid standards needed in LipidomicNet	Lipid standards used in LipidomicNet
Lipid standards used in LipidomicNet - Glycerophospholipids	Lipid standards used in LipidomicNet - Sphingolipids	Lipid standards used in LipidomicNet - Sterols
LipidomicNet-ENOR joint workshop	LipidomicNet-ENOR workshop program	LipidomicNet Library
LipidomicNet publications	Lipidomics technologies	Lipoprotein analysis by FPLC - ESI-MS/MS - Wiesner et al.
Lipoprotein preparation	Lipoprotein separation by FPLC - Wiesner et al.	Lipoprotein sphingolipids as potential atherogenic factors
Lipoxins	Lipoxins (FA0304)	Lysophosphatidylcholine - ESI-MS/MS - Liebisch et al.
Lysophosphatidylcholine determination - Liebisch et al.	Lysophospholipids	Lysosomal lipid-binding proteins: purification
Lysosomal storage disorders	MT 01.10.2008	MT 02.07.2008
MT 03.03.2010	MT 03.09.2008	MT 03.12.2008
MT 05.11.2008	MT 06.08.2008	MT 08.10.2008
MT 09.07.2008	MT 10.09.2008	MT 10.11.2008
MT 10.12.2008	MT 13.08.2008	MT 14.01.2009
MT 15.06.2008	MT 15.10.2008	MT 16.07.2008
MT 17.09.2008	MT 17.12.2008	MT 19.11.2008
MT 20.08.2008	MT 21.01.2009	MT 22.10.2008
MT 23.07.2008	MT 24.09.2008	MT 24.12.2008
MT 25.06.2008	MT 26.11.2008	MT 27.08.2008
MT 29.10.2008	MT 30.07.2008	Magnetic bead isolation of Mitochondria and following western blot analysis
Main Page	Masoodi et al	Masoodi et al.
Masoodi et al..	Masoodi et al...	Mass Spectrometry of Lipids SPPs
Mass spectrometric profiling of free extractable stratum corneum ceramides by means of LC/APCI-MS	Mass spectrometric profiling of free extractable stratum corneum ceramides by means of LC/APCI-MS-Farwanah et al.	Mass spectrometry
Mechanisms of bile acid feedback inhibition of gene transcription	Meeting Plan	Megacaryocyte Platelet Synopsis
Megakaryocyte Platelet Synopsis	Membranes	Metabolic diseases
Metabolism and subcellular compartmentalization of sphingolipids	Methods established in LipidomicNet	Mezine et al.
Microarray SPPs	Microarrays	Monoacylglycerophospholipids
Monocyte Isolation	Monoradylglycerols	Mouse Key Nodes
Netherlands	Neutral glycosphingolipids (SP05)	New page
Nicolaou et al	No Access	Non targeted Lipid Profiling LC-FT-MS/MS
Nuclear receptor regulation of bile acid synthesis	Nuclear receptors	Offline nanoESI Phospholipid Profiling - LC-MS/MS
Other hydroxylase pathways	Oxidized glycerophospholipids (GP20)	Oxysterol-binding proteins
Oxysterol binding assay	Oxysterols	P01 UHREG
P02 UU	P03 CMNS	P04 INSERM
P05 LUMC	P06 ETHZ	P07 UNIGRAZ
P08 UGOT	P09 JUMC	P10 MPG
P11 BRC HAS	P12 IEE SAS	P13 BABRAHAM
P14 UH	P15A UBO	P15B UBO
P15 UBO	P16 EMBL	P17 UMG-GOE
P17 UMG GOE	P18 BIOBASE	P19 ZORA
P20 PROTAGEN	P21 INTEGROMICS	P22 UOXF.H7
P23 MRC	P24 JKU	P25 ISB
P26 WWU	P27 JUMC	P28 JKU
PPAR	PRP-platelet rich plasma	PXR/SXR
Palmitoylation	Perwaiz et al.	Phosphatidic acid
Phosphatidylcholine	Phosphatidylcholine / Sphingomyelin - ESI-MS/MS - Liebisch et al.	Phosphatidylcholine / Sphingomyelin determination - Liebisch et al.
Phosphatidylethanolamine	Phosphatidylethanolamine-based plasmalogens - ESI-MS/MS - Liebisch et al.	Phosphatidylethanolamine - ESI-MS/MS - Liebisch et al.
Phosphatidylglycerol	Phosphatidylinositol and -inositolphosphates	Phosphatidylinositol metabolism
Phosphatidylinositol metabolismmetabolism	Phosphatidylserine	Phosphatidylserine - ESI-MS/MS - Liebisch et al.
Phospholipid and neutral lipid droplet staining	Phospholipid class-specific profiling by LC/MS (Utrecht protocol)	Phospholipid metabolism
Phospholipidosis detection	Phosphosphingolipids (SP03)	Plant sterols
Platelet isolation	Polyketides	Prenol Lipids
Prenylation	Preparation of delipidated FCS (Thiele lab)	Preprocessing and differential expression with CARMAWeb
Preprocessing of Single Colored Agilent Arrays	Press releases	Processing Pipeline for High-Content Imaging SPPs
Processing Pipeline for Mass Spectrometry of Lipids SPPs	Processing Pipeline for Microarray SPPs	Processing Pipeline for Proteomics SPPs
Processing Pipeline for TaqMan SPPs	Processing Pipelines	Profiling of Neutral Lipids (Utrecht protocol)
Profiling of Phospholipids (Utrecht protocol)	Project Management	Project Status Report for Period 1
Project Status Report for Period 2	Project management	Proposal for lipid MS nomenclature
Proposal on lipid standards to be synthesized	Prostaglandin quantification - GC-MS	Prostaglandins
Prostaglandins (FA0301)	Proteomics SPPs	Protocols for stable isotope labeling
Purification LDs from mouse adipocytes	Purification LDs from mouse hepatocytes	Quinones and hydroquinones
ROR	RT-PCR SPPs	Real time interaction between immobilized liposomes and lipid binding proteins by Surface Plasmon Resonance
Regensburg Chip Hybridization Center	Resolvins, Docosatrienes and Neuroprotectins	Resources
Retinoid determination - Gunderson et al.	Retinoid determination - Kane et al.	Retinoid determination - Wang et al.
Roche SPPs	SHP-dependent mechanism	SHP-independent mechanisms
SVF human cells isolation and culture (JUMC)	Saccharolipids	Schmidt et al
Schmidt et al.	Schwedhelm et al.	Secosteroids (ST03)
Setup of a lipid species data base	Setup of a lipid species database	SiRNA knock down - A431 cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)
SiRNA knock down - A431 cells - 24 well plate - biochemical analysis (Thiele lab)	SiRNA knock down - HeLa cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)	SiRNA knock down - HeLa cells - 24 well plate - biochemical analysis (Thiele lab)
SiRNA knock down - HuH7 cells - 24 well plate - analysis by fluorescence microscopy (Thiele lab)	SiRNA knock down - HuH7 cells - 24 well plate - biochemical analysis (Thiele lab)	Signalling pathways induced by sphingolipids
Sircar et al.	Site Map	Skin lipid analysis - HPTLC - Farwanah et al.
Sphingoid bases/-phosphates	Sphingoid bases (SP01)	Sphingolipid analysis by mass spectrometry
Sphingolipid profiling - LC-MS/MS - Scherer et al.	Sphingolipids	Sphingolipids (SP)
Sphingolipids and apoptosis	Sphingolipids and cell differentiation	Sphingolipids and cell migration and adhesion
Sphingolipids and vascular tone regulation	Sphingomyelin	Sphingosine-1-phosphate, Lysophosphatidic acid - LC-MS/MS - Scherer et al.
Sphingosine-1-phosphate - LC-MS/MS - Berdyshev et al.	Sphingosine-1-phosphate - LC-MS/MS - Bielawski et al.	Sphingosine-1-phosphate - LC-MS/MS - Schmidt et al.
Sphingosine-1-phosphate determination - Berdyshev et al.	Sphingosine-1-phosphate determination - Bielawski et al.	Sphingosine-1-phosphate determination - Schmidt et al.
Sphingosine-1-phosphate quantitation	Sphingosine/Sphinganine - LC-MS/MS - Lieser et al.	Sphingosine/Sphinganine determination - Lieser et al.
Staining of cells	Staining of lipid droplets with Nile red and BODIPY 493/503	Staining of lipid droplets with oil Red O
Standard Processing Procedures	Steering Committee Meeting - 01/2010	Steering Committee Meeting - 01/2011
Steering Committee Meeting - 01/2012	Steering Committee Meeting - 07/2009	Steering Committee Meeting - 07/2010
Steering Committee Meeting - 11/2008	Steering Committee Meeting 2011/06	Steering Committee Meeting Munich 2010
Steering Committee Meeting Regensburg, July 2009	Steering Committee Meeting Regensburg, November 2008	Steering Committee Meeting Regensburg July 2009
Steering Committee Review Meeting Zurich, July 5-6, 2010	Steroid conjugates (ST05)	Steroid hormones
Steroids (ST02)	Sterol analysis by mass spectrometry	Sterols
Sterols (ST)	Sterols (ST) determination - Lembcke et al.	Sterols (ST) determination - Mezine et al.
Sterols (ST01)	Subcategory: Monoacylglycerophospholipids	Synthesis and metabolism of straight chain fatty acids
Synthesis of PS and formation of PE in the mitochondrial PSDecarboxylation pathway	TF8 ActionPoints2010	TF 8 13.08.2008
TF 8 30.07.2008	TF IV 02.09.2008	TF IV 05.08.2008
TF IV 09.12.2008	TF IV 11.11.2008	TF IV 14.10.2008
TF IV 16.09.2008	TF IV 19.08.2008	TF IV 20.01.2009
TF IV 23.12.2008	TF IV 25.11.2008	TF IV 28.10.2008
TF IV 30.09.2008	TF IV 30.09.2008?action=view	TF I 21.10.2008
TF VIII 03.12.2008	TF VIII 08.10.2008	TF VIII 13.08.2008
TF VIII 19.11.2008	TF VIII 22.04.2009	TF VIII 22.10.2008
TF VIII 28.01.2009	TF VIII 30.07.2008	TF VIII ActionPoints 2010
TF VII 01.10.2008	TF VII 02.10.2008	TF VII 03.09.2008
TF VII 06.08.2008	TF VII 10.12.2008	TF VII 12.11.2008
TF VII 15.10.2008	TF VII 17.09.2008	TF VII 17.10.2008
TF VII 20.08.2008	TF VII 24.12.2008	TF VII 26.11.2008
TF VII 29.10.2008	Tagged constructs of lipid droplet proteins for imaging	Tagliacozzi et al.
TaqMan Arrays	TaqMan Low-Density Array (TLDA)	TaqMan SPPs
Task Force I	Task Force II	Task Force III
Task Force IV	Task Force IX	Task Force I - internal pages
Task Force Overview	Task Force V	Task Force VI
Task Force VII	Task Force VIII	Task Force VIII phone conferences
Task Forces	Templates	Templates for new articles
Templates for presentations	Teststartpage	Teunissen et al.
The classic bile acid biosynthetic (neutral) pathway	The “Kennedy pathway” as the majour route of PC and PE synthesis	Thin layer chromatography (Thiele Lab)
Thromboxanes	Thromboxanes (FA0303)	Tools
Total Lipid Profiling LTQ-FT	Training	Transferproteins – CETP, PLTP
Triglyceride hydrolysis kinetics	UK	Uptake of glycerophospholipid precursors and the interconversion of glycerophospholipid species
Visualization of fixed/permeabilized cultured cells (JUMC)	Von Eckardstein	WP1
WP2	WP3	WP4
WP5	WP6	WP7
WP8	WP III TF V 05.09.2008	WP III TF V 14.10.2008
WP III TF V 25.11.2008	Wang et al.	Webex
Western blot of membrane proteins	Wiki Roadmap	Wikipedia:Customisation
Wikipedia:Introduction	Wikipedia:tutorial	Work Package Overview
Workshop - 03/2009	Workshop - 04/2010	Workshop - 09/2008
Workshop - 09/2008 - presentations	Workshop - 10/2009	Workshop - 10/2009 - Abstracts
Workshop - 2008/09	Workshop - 2008/09 - presentations	Workshop - 2009/03
Workshop - 2009/10	Workshop - 2009/10 - Abstracts	Workshop - 2010/04
Workshop - 2011/05	Workshop - 2011/10	Workshop Graz 2009-10-26 27
Workshop Graz 2009-10-26 27 Abstracts	Yue et al	Yue et al.

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