Processing Pipeline for TaqMan SPPs

From LipidomicsWiki

The implemented algorithms have been integrated into a standalone application: LipiMiner.

For such an application, Integromics S.L. has developed a workflow repository, written in C++, which defines the order for the algorithms to be executed. Afterwards the results are shown by a visualization library, also implemented in C++ code and developed by Integromics S.L. The integration among R and C++ is done by a COM (Component Object Model) object. This is a binary interface standard for software componentry introduced by Microsoft in 1993.

The software is available on request: lipiminer@integromics.com

Contents 1 Plots for the quality control of Biological replicates: 2 Detectability criteria: 3 Relative quantification: 4 Clustering: 5 TaqMan SPPs 6 Implementation of TaqMan SPPs

Plots for the quality control of Biological replicates:

 

Detectability criteria:

Relative quantification:

Clustering:

TaqMan SPPs

TaqMan SPPs Standard Processing Procedures

Standard Processing Procedures Main Page

Implementation of TaqMan SPPs

Implementation of TaqMan SPPs